Nature mag: very old dog, very new tricks.

Nature, one of the top 2 science journals, has an editorial out suggesting that scientists should publish their raw data in open-protocol online databases and use creative commons licenses to “stipulate both rights and credits for the reuse of data, while allowing its uninterrupted access by machines”, which is a nice way of putting it. And a brilliant thing to say. The editorial also hints at the disruptive (in a good way) potential of blog-model research publishing and collaborating schemes, a la arVix, which blows my mind in equal proportion to the degree to which I don’t yet quite understand it.

Back when the human genome was published, Nature was the journal that insisted that if the research groups behind the project wanted to publish in their journal, they would have to make the data, i.e. the map of the human genome, availble for review according to the basic tenents of the publication of peer-reviewed science. The other top science journal, “Science”, allowed some baloney compromise wherein people pretty much couldn’t access the data because the companies involved wanted to make money off it.

At the time, the impression was that Nature was the dawg and Science were wanks. This editorial confirms that hypothesis.

I’m fascinated to see how the arXiv model, currently co-dominant with traditional journals as the primary platform through which high energy physics research publishes, will play out across the sciences. ArXiv is a big step in a different direction in it’s current incarnation, and it suggests even more disruptive possibilities. Research via Blog. Rather than publishing a single canonical paper, breaking down your research into discrete steps and revealing those for comments from others, and citing the effects of other’s research on your own, along the way. Nature has to be thinking: if that’s where science published is headed, where is Nature headed? What is the role of a journal in that mileu? What of specific questions like: what happens to author attribution if your ideas are developed organically across a dispersed community of scientists that paralells the modern blogoshpere? How many authors do you allow for a given paper?

Well, Nature has some things to say about that, too. In the current issue’s News Features, there is a series of articles touching on these and related themes. Read them now, I assume they go behind a pay-wall after once the next issue comes out (raising the issue of open-access publishing, and the fact that Nature isn’t and won’t be anytime soon, but let’s look past that for now).

Doesn’t it give you a warm glow to think that the establishment might be composed of smart people who care about the larger good, even if that requires change? Bit shocking.

Nature also has this comic book about synthetic biology available online, as well as in boring old Nature 11, 429 – 434 (2004). Consequently they are scoring two links on BoingBoing in one day, which has got to be a all-world record for an academic journal.

Right on Nature, right on.

2 comments:

[…] This is I think the first time I’ve used a paper from arXiv (maybe as I venture deeper into the statistical physics this will become more common). I’m still all crushy on the idea of the gradual transmogrification of peer-reviewed scientific publishing into something more organic and transparent. What hadn’t occurred to me previously about the arXiv was that it not only allows for a paper to be born piece-meal and iteratively, but by existing in an editable space the paper never really has to be finished. Potentially, the most canonical thing about it is just the URL it’s attached to, and every time you needed the paper you would access it fresh and perhaps perform a “compare” to see what new has developed since the last time you read it. There will be a continuum of rigor vs. freshness with wikis and inked napkins on one end and text books on the other and academic papers will perhaps shift within it, or have some way of indicating where in that continuum they claim to exist. Papers will have tiers of authors, or just an ‘author cloud’. Every paper about networks will ironically be more a network than a paper. Bruce Sterling will dress in rags and stand on campus orating in Austin-tinged Texan accents about the coming infoapocalype, again. […]

[…] Of course it’s easy enough to say all of this when you (I) don’t actually generate many actionable ideas. Most of my work, when I do any, is explicitly on the the building-on-others end of the building-on-others to eureka-original-idea scale. So I am naturally predisposed to advocating for the freedom of ideas to be built on. Nonetheless, I am convinced enough that I would still feel this way even if I do reach the status of full-time primary researcher that I want to begin establishing my openness habits now. For that matter, given that I believe in the creative worthiness of all the other steps that come after eureka-idea, I think it’s okay to blog about those steps too. In any case, I want to chronicle my stuff throughout it’s life cycle, not just once it’s been published. I want to catch some of the crazy energy being generated by those wild ones over in high-energy physics. […]

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